SIGA.py

A command line tool to transform genome annotations in GFF format into the semantically interoperable RDF format.

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181 commits | Last update: March 29, 2018

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What SIGA.py can do for you

  • An easy-to-use command-line tool for bioinformaticians
  • Transforms genome annotations in GFF files into RDF graphs using a config file
  • Supports different GFF versions and RDF serializations (formats)
  • Used in combination with RDF stores or Linked Data platforms
Tags
  • Inter-operability & linked data
Programming Language
  • Python
License
  • Apache-2.0
Source code

Participating organizations

Contributors

  • Arnold Kuzniar
    Netherlands eScience Center
  • Rena Bakhshi
    Netherlands eScience Center
Contact person
Arnold Kuzniar
Netherlands eScience Center