MAGMa

MAGMa is an online application for the automatic chemical annotation of mass spectrometry data.

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3
contributors
1227 commits | Last update: October 17, 2018

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What MAGMa can do for you

  • Supports mass spectrometrists to chemically annotate fragmentation data
  • Retrieves and ranks candidate molecules and substructures for parent and product ions
  • Provides metabolic reaction rules to generate candidate molecules
  • Provides a powerful user interface to interpret the results
Tags
  • Visualization
  • Big data
Programming Language
  • Python
  • JavaScript
  • Cython
License
  • Apache-2.0
Source code

Participating organizations

Netherlands Metabolomics Institute

My group has had an excellent run of almost 1 year now running MAGMa as part of our cluster-based compound ID workflow - it is really a great program.
– Lee Ferguson , Department of Civil & Environmental Engineering, Duke University

Contributors

  • Lars Ridder
    Netherlands eScience Center
  • Stefan Verhoeven
    Netherlands eScience Center
  • Marijn Sanders
    Netherlands eScience Center
Contact person
Lars Ridder
Netherlands eScience Center