Allelic Variation Explorer

doi:10.5281/zenodo.1145887

Allelic Variation Explorer

If you are studying how single nucleotide polymorphisms are clustered in genomic samples, then the Allelic Variation Explorer can help you visualize them.

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214 commits | Last update: March 23, 2018

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What Allelic Variation Explorer can do for you

It provides a genome browser with a track where the samples which have the same SNPs are clustered together, it can be used by bioinformations to explain why certain samples have the same phenotype
It takes variants of a large number of samples and for the requested genomic range it performs clustering and visualizes the clusters
the clustering is done quick and on the fly
the reference genome, gene and feature tracks are rendered from static files, so you don't need any application server just a static web server